Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.59■■□□□ 1.05
Cldnd1Q9CQX5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cldnd1Q9CQX5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Cldnd1Q9CQX5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cldnd1Q9CQX5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cldnd1Q9CQX5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cldnd1Q9CQX5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Cldnd1Q9CQX5 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.58■■□□□ 1.05
Cldnd1Q9CQX5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cldnd1Q9CQX5 Gm43060-201ENSMUST00000200621 289 ntBASIC21.58■■□□□ 1.05
Cldnd1Q9CQX5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Cldnd1Q9CQX5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cldnd1Q9CQX5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cldnd1Q9CQX5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cldnd1Q9CQX5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Cldnd1Q9CQX5 Gm7143-201ENSMUST00000222811 859 ntBASIC21.57■■□□□ 1.04
Cldnd1Q9CQX5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cldnd1Q9CQX5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cldnd1Q9CQX5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cldnd1Q9CQX5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cldnd1Q9CQX5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.56■■□□□ 1.04
Cldnd1Q9CQX5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cldnd1Q9CQX5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cldnd1Q9CQX5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cldnd1Q9CQX5 Gm42642-201ENSMUST00000200683 355 ntBASIC21.56■■□□□ 1.04
Cldnd1Q9CQX5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cldnd1Q9CQX5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cldnd1Q9CQX5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cldnd1Q9CQX5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cldnd1Q9CQX5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.55■■□□□ 1.04
Cldnd1Q9CQX5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.55■■□□□ 1.04
Cldnd1Q9CQX5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cldnd1Q9CQX5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.55■■□□□ 1.04
Cldnd1Q9CQX5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cldnd1Q9CQX5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cldnd1Q9CQX5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cldnd1Q9CQX5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Cldnd1Q9CQX5 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.54■■□□□ 1.04
Cldnd1Q9CQX5 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.54■■□□□ 1.04
Cldnd1Q9CQX5 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.54■■□□□ 1.04
Cldnd1Q9CQX5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cldnd1Q9CQX5 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.53■■□□□ 1.04
Cldnd1Q9CQX5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cldnd1Q9CQX5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cldnd1Q9CQX5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cldnd1Q9CQX5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cldnd1Q9CQX5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cldnd1Q9CQX5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cldnd1Q9CQX5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cldnd1Q9CQX5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Cldnd1Q9CQX5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cldnd1Q9CQX5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cldnd1Q9CQX5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cldnd1Q9CQX5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cldnd1Q9CQX5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Cldnd1Q9CQX5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cldnd1Q9CQX5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cldnd1Q9CQX5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cldnd1Q9CQX5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cldnd1Q9CQX5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cldnd1Q9CQX5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cldnd1Q9CQX5 Gm37179-201ENSMUST00000194862 823 ntBASIC21.5■■□□□ 1.03
Cldnd1Q9CQX5 Spcs1-204ENSMUST00000226782 949 ntBASIC21.5■■□□□ 1.03
Cldnd1Q9CQX5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cldnd1Q9CQX5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cldnd1Q9CQX5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cldnd1Q9CQX5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cldnd1Q9CQX5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cldnd1Q9CQX5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cldnd1Q9CQX5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cldnd1Q9CQX5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cldnd1Q9CQX5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cldnd1Q9CQX5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cldnd1Q9CQX5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 Gm10849-201ENSMUST00000100397 618 ntBASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 Gm40848-201ENSMUST00000221998 324 ntBASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cldnd1Q9CQX5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cldnd1Q9CQX5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cldnd1Q9CQX5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cldnd1Q9CQX5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cldnd1Q9CQX5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cldnd1Q9CQX5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.47■■□□□ 1.03
Cldnd1Q9CQX5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.47■■□□□ 1.03
Cldnd1Q9CQX5 Gm27011-201ENSMUST00000182352 972 ntBASIC21.47■■□□□ 1.03
Cldnd1Q9CQX5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cldnd1Q9CQX5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cldnd1Q9CQX5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cldnd1Q9CQX5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cldnd1Q9CQX5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cldnd1Q9CQX5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.46■■□□□ 1.03
Cldnd1Q9CQX5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cldnd1Q9CQX5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms