Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha11Q91Y19 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha11Q91Y19 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha11Q91Y19 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdha11Q91Y19 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdha11Q91Y19 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha11Q91Y19 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdha11Q91Y19 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha11Q91Y19 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha11Q91Y19 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha11Q91Y19 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha11Q91Y19 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha11Q91Y19 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pcdha11Q91Y19 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha11Q91Y19 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha11Q91Y19 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha11Q91Y19 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.85■■□□□ 1.09
Pcdha11Q91Y19 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Pcdha11Q91Y19 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Pcdha11Q91Y19 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.84■■□□□ 1.09
Pcdha11Q91Y19 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.84■■□□□ 1.09
Pcdha11Q91Y19 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha11Q91Y19 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.84■■□□□ 1.09
Pcdha11Q91Y19 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha11Q91Y19 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha11Q91Y19 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha11Q91Y19 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha11Q91Y19 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.84■■□□□ 1.09
Pcdha11Q91Y19 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha11Q91Y19 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Pcdha11Q91Y19 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha11Q91Y19 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha11Q91Y19 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha11Q91Y19 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.83■■□□□ 1.09
Pcdha11Q91Y19 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha11Q91Y19 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdha11Q91Y19 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
Pcdha11Q91Y19 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.82■■□□□ 1.08
Pcdha11Q91Y19 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha11Q91Y19 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.81■■□□□ 1.08
Pcdha11Q91Y19 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.81■■□□□ 1.08
Pcdha11Q91Y19 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha11Q91Y19 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha11Q91Y19 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha11Q91Y19 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Pcdha11Q91Y19 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdha11Q91Y19 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha11Q91Y19 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.8■■□□□ 1.08
Pcdha11Q91Y19 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha11Q91Y19 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Pcdha11Q91Y19 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha11Q91Y19 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha11Q91Y19 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha11Q91Y19 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
Pcdha11Q91Y19 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha11Q91Y19 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdha11Q91Y19 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.78■■□□□ 1.08
Pcdha11Q91Y19 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha11Q91Y19 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha11Q91Y19 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha11Q91Y19 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha11Q91Y19 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha11Q91Y19 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Pcdha11Q91Y19 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdha11Q91Y19 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha11Q91Y19 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
Pcdha11Q91Y19 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha11Q91Y19 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdha11Q91Y19 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha11Q91Y19 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha11Q91Y19 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha11Q91Y19 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha11Q91Y19 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pcdha11Q91Y19 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.75■■□□□ 1.07
Pcdha11Q91Y19 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha11Q91Y19 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdha11Q91Y19 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.75■■□□□ 1.07
Pcdha11Q91Y19 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha11Q91Y19 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha11Q91Y19 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha11Q91Y19 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Gm9847-201ENSMUST00000052528 599 ntBASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms