Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.93■□□□□ 0.78
Pcdhb20Q91XZ9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb20Q91XZ9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.93■□□□□ 0.78
Pcdhb20Q91XZ9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb20Q91XZ9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb20Q91XZ9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb20Q91XZ9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.92■□□□□ 0.78
Pcdhb20Q91XZ9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.92■□□□□ 0.78
Pcdhb20Q91XZ9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb20Q91XZ9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb20Q91XZ9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb20Q91XZ9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb20Q91XZ9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb20Q91XZ9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb20Q91XZ9 Gm12922-201ENSMUST00000120626 809 ntBASIC19.9■□□□□ 0.78
Pcdhb20Q91XZ9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb20Q91XZ9 Gm9847-201ENSMUST00000052528 599 ntBASIC19.9■□□□□ 0.78
Pcdhb20Q91XZ9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb20Q91XZ9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhb20Q91XZ9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Pcdhb20Q91XZ9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb20Q91XZ9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb20Q91XZ9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdhb20Q91XZ9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb20Q91XZ9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb20Q91XZ9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Pcdhb20Q91XZ9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb20Q91XZ9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.88■□□□□ 0.77
Pcdhb20Q91XZ9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb20Q91XZ9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb20Q91XZ9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb20Q91XZ9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb20Q91XZ9 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.88■□□□□ 0.77
Pcdhb20Q91XZ9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdhb20Q91XZ9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdhb20Q91XZ9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb20Q91XZ9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb20Q91XZ9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb20Q91XZ9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb20Q91XZ9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb20Q91XZ9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb20Q91XZ9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb20Q91XZ9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb20Q91XZ9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb20Q91XZ9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.86■□□□□ 0.77
Pcdhb20Q91XZ9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb20Q91XZ9 Gm13241-201ENSMUST00000094493 780 ntBASIC19.86■□□□□ 0.77
Pcdhb20Q91XZ9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb20Q91XZ9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb20Q91XZ9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb20Q91XZ9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb20Q91XZ9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhb20Q91XZ9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb20Q91XZ9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb20Q91XZ9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb20Q91XZ9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb20Q91XZ9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb20Q91XZ9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.85■□□□□ 0.77
Pcdhb20Q91XZ9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb20Q91XZ9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb20Q91XZ9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb20Q91XZ9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb20Q91XZ9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb20Q91XZ9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb20Q91XZ9 Gm9870-201ENSMUST00000063874 645 ntBASIC19.84■□□□□ 0.77
Pcdhb20Q91XZ9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhb20Q91XZ9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb20Q91XZ9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhb20Q91XZ9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Pcdhb20Q91XZ9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Pcdhb20Q91XZ9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb20Q91XZ9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb20Q91XZ9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb20Q91XZ9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb20Q91XZ9 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.81■□□□□ 0.76
Pcdhb20Q91XZ9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb20Q91XZ9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhb20Q91XZ9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb20Q91XZ9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb20Q91XZ9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms