Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga3Q91XY5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga3Q91XY5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga3Q91XY5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga3Q91XY5 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.4■□□□□ 0.54
Pcdhga3Q91XY5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga3Q91XY5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Pcdhga3Q91XY5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhga3Q91XY5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhga3Q91XY5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdhga3Q91XY5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhga3Q91XY5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga3Q91XY5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhga3Q91XY5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdhga3Q91XY5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga3Q91XY5 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.38■□□□□ 0.53
Pcdhga3Q91XY5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga3Q91XY5 Gm43566-201ENSMUST00000196851 808 ntBASIC18.38■□□□□ 0.53
Pcdhga3Q91XY5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhga3Q91XY5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga3Q91XY5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga3Q91XY5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga3Q91XY5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga3Q91XY5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga3Q91XY5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhga3Q91XY5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga3Q91XY5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.37■□□□□ 0.53
Pcdhga3Q91XY5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.37■□□□□ 0.53
Pcdhga3Q91XY5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Pcdhga3Q91XY5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga3Q91XY5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Pcdhga3Q91XY5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhga3Q91XY5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga3Q91XY5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga3Q91XY5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga3Q91XY5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga3Q91XY5 Gm13238-201ENSMUST00000117655 780 ntBASIC18.34■□□□□ 0.53
Pcdhga3Q91XY5 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.34■□□□□ 0.53
Pcdhga3Q91XY5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga3Q91XY5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhga3Q91XY5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga3Q91XY5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga3Q91XY5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhga3Q91XY5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga3Q91XY5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga3Q91XY5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga3Q91XY5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga3Q91XY5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Iqck-206ENSMUST00000208658 2891 ntBASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhga3Q91XY5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga3Q91XY5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga3Q91XY5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms