Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Fam20bQ8VCS3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Fam20bQ8VCS3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam20bQ8VCS3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam20bQ8VCS3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Fam20bQ8VCS3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam20bQ8VCS3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Fam20bQ8VCS3 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.2■□□□□ 0.66
Fam20bQ8VCS3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.2■□□□□ 0.66
Fam20bQ8VCS3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam20bQ8VCS3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Fam20bQ8VCS3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam20bQ8VCS3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam20bQ8VCS3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam20bQ8VCS3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam20bQ8VCS3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Fam20bQ8VCS3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Fam20bQ8VCS3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.18■□□□□ 0.66
Fam20bQ8VCS3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Fam20bQ8VCS3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Fam20bQ8VCS3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam20bQ8VCS3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam20bQ8VCS3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Fam20bQ8VCS3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.17■□□□□ 0.66
Fam20bQ8VCS3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Fam20bQ8VCS3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Fam20bQ8VCS3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam20bQ8VCS3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fam20bQ8VCS3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam20bQ8VCS3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam20bQ8VCS3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam20bQ8VCS3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam20bQ8VCS3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fam20bQ8VCS3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam20bQ8VCS3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.16■□□□□ 0.66
Fam20bQ8VCS3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Fam20bQ8VCS3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Fam20bQ8VCS3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Fam20bQ8VCS3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam20bQ8VCS3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fam20bQ8VCS3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam20bQ8VCS3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Fam20bQ8VCS3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam20bQ8VCS3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam20bQ8VCS3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Golph3-202ENSMUST00000226517 2359 ntBASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fam20bQ8VCS3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.11■□□□□ 0.65
Fam20bQ8VCS3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Fam20bQ8VCS3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fam20bQ8VCS3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.11■□□□□ 0.65
Fam20bQ8VCS3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fam20bQ8VCS3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fam20bQ8VCS3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Fam20bQ8VCS3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms