Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc59Q8R2N0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc59Q8R2N0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc59Q8R2N0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc59Q8R2N0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc59Q8R2N0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ccdc59Q8R2N0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc59Q8R2N0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc59Q8R2N0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc59Q8R2N0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc59Q8R2N0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Ccdc59Q8R2N0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc59Q8R2N0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc59Q8R2N0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.52■□□□□ 0.72
Ccdc59Q8R2N0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc59Q8R2N0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc59Q8R2N0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc59Q8R2N0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc59Q8R2N0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc59Q8R2N0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc59Q8R2N0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc59Q8R2N0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc59Q8R2N0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc59Q8R2N0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccdc59Q8R2N0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc59Q8R2N0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc59Q8R2N0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc59Q8R2N0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc59Q8R2N0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc59Q8R2N0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc59Q8R2N0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc59Q8R2N0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc59Q8R2N0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc59Q8R2N0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ccdc59Q8R2N0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc59Q8R2N0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc59Q8R2N0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc59Q8R2N0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc59Q8R2N0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.48■□□□□ 0.71
Ccdc59Q8R2N0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc59Q8R2N0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc59Q8R2N0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc59Q8R2N0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc59Q8R2N0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc59Q8R2N0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc59Q8R2N0 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.47■□□□□ 0.71
Ccdc59Q8R2N0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc59Q8R2N0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc59Q8R2N0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc59Q8R2N0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc59Q8R2N0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc59Q8R2N0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc59Q8R2N0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc59Q8R2N0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc59Q8R2N0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc59Q8R2N0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc59Q8R2N0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc59Q8R2N0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc59Q8R2N0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc59Q8R2N0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc59Q8R2N0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc59Q8R2N0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc59Q8R2N0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc59Q8R2N0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc59Q8R2N0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc59Q8R2N0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc59Q8R2N0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc59Q8R2N0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc59Q8R2N0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc59Q8R2N0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc59Q8R2N0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc59Q8R2N0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc59Q8R2N0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc59Q8R2N0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc59Q8R2N0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.43■□□□□ 0.7
Ccdc59Q8R2N0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc59Q8R2N0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc59Q8R2N0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms