Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.08■□□□□ 0.97
Sfr1Q8BP27 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.08■□□□□ 0.97
Sfr1Q8BP27 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sfr1Q8BP27 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.08■□□□□ 0.96
Sfr1Q8BP27 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sfr1Q8BP27 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sfr1Q8BP27 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sfr1Q8BP27 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Sfr1Q8BP27 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sfr1Q8BP27 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sfr1Q8BP27 Gm7417-201ENSMUST00000192950 473 ntBASIC21.07■□□□□ 0.96
Sfr1Q8BP27 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.07■□□□□ 0.96
Sfr1Q8BP27 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.07■□□□□ 0.96
Sfr1Q8BP27 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sfr1Q8BP27 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Sfr1Q8BP27 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sfr1Q8BP27 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Sfr1Q8BP27 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sfr1Q8BP27 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sfr1Q8BP27 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sfr1Q8BP27 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.06■□□□□ 0.96
Sfr1Q8BP27 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sfr1Q8BP27 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sfr1Q8BP27 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sfr1Q8BP27 Gm14117-201ENSMUST00000122417 843 ntBASIC21.05■□□□□ 0.96
Sfr1Q8BP27 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sfr1Q8BP27 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sfr1Q8BP27 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.05■□□□□ 0.96
Sfr1Q8BP27 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sfr1Q8BP27 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Sfr1Q8BP27 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.04■□□□□ 0.96
Sfr1Q8BP27 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sfr1Q8BP27 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sfr1Q8BP27 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sfr1Q8BP27 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.04■□□□□ 0.96
Sfr1Q8BP27 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.04■□□□□ 0.96
Sfr1Q8BP27 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sfr1Q8BP27 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sfr1Q8BP27 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sfr1Q8BP27 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sfr1Q8BP27 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sfr1Q8BP27 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sfr1Q8BP27 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sfr1Q8BP27 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sfr1Q8BP27 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sfr1Q8BP27 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Sfr1Q8BP27 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sfr1Q8BP27 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.02■□□□□ 0.96
Sfr1Q8BP27 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sfr1Q8BP27 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.02■□□□□ 0.96
Sfr1Q8BP27 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.02■□□□□ 0.96
Sfr1Q8BP27 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Sfr1Q8BP27 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sfr1Q8BP27 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sfr1Q8BP27 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sfr1Q8BP27 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sfr1Q8BP27 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sfr1Q8BP27 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.01■□□□□ 0.95
Sfr1Q8BP27 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sfr1Q8BP27 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sfr1Q8BP27 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sfr1Q8BP27 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sfr1Q8BP27 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.01■□□□□ 0.95
Sfr1Q8BP27 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sfr1Q8BP27 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sfr1Q8BP27 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sfr1Q8BP27 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sfr1Q8BP27 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sfr1Q8BP27 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sfr1Q8BP27 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sfr1Q8BP27 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21■□□□□ 0.95
Sfr1Q8BP27 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sfr1Q8BP27 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Sfr1Q8BP27 Gm37415-201ENSMUST00000192265 2054 ntBASIC21■□□□□ 0.95
Sfr1Q8BP27 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Sfr1Q8BP27 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sfr1Q8BP27 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sfr1Q8BP27 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sfr1Q8BP27 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sfr1Q8BP27 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Sfr1Q8BP27 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sfr1Q8BP27 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sfr1Q8BP27 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sfr1Q8BP27 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sfr1Q8BP27 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sfr1Q8BP27 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sfr1Q8BP27 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sfr1Q8BP27 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sfr1Q8BP27 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sfr1Q8BP27 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Sfr1Q8BP27 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sfr1Q8BP27 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.97■□□□□ 0.95
Sfr1Q8BP27 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Sfr1Q8BP27 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sfr1Q8BP27 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sfr1Q8BP27 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Sfr1Q8BP27 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sfr1Q8BP27 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.96■□□□□ 0.95
Sfr1Q8BP27 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.96■□□□□ 0.95
Sfr1Q8BP27 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms