Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 GUSBP5-202ENST00000510805 1989 ntBASIC19.14■□□□□ 0.65
ZNF546Q86UE3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF546Q86UE3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 SLC25A24-204ENST00000569674 2357 ntBASIC19.13■□□□□ 0.65
ZNF546Q86UE3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF546Q86UE3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF546Q86UE3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF546Q86UE3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF546Q86UE3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ZNF546Q86UE3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF546Q86UE3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ZNF546Q86UE3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF546Q86UE3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF546Q86UE3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 FOXO3B-201ENST00000395675 1928 ntBASIC19.11■□□□□ 0.65
ZNF546Q86UE3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF546Q86UE3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ZNF546Q86UE3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF546Q86UE3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.1■□□□□ 0.65
ZNF546Q86UE3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF546Q86UE3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF546Q86UE3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF546Q86UE3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF546Q86UE3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF546Q86UE3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ZNF546Q86UE3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF546Q86UE3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
ZNF546Q86UE3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.08■□□□□ 0.65
ZNF546Q86UE3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF546Q86UE3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF546Q86UE3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF546Q86UE3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF546Q86UE3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF546Q86UE3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ZNF546Q86UE3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF546Q86UE3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF546Q86UE3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF546Q86UE3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.07■□□□□ 0.64
ZNF546Q86UE3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF546Q86UE3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF546Q86UE3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms