Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnrc18Q80WC3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnrc18Q80WC3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tnrc18Q80WC3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnrc18Q80WC3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tnrc18Q80WC3 Gm42642-201ENSMUST00000200683 355 ntBASIC21.27■■□□□ 1
Tnrc18Q80WC3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tnrc18Q80WC3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tnrc18Q80WC3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tnrc18Q80WC3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.27■■□□□ 1
Tnrc18Q80WC3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnrc18Q80WC3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tnrc18Q80WC3 Gm10033-202ENSMUST00000211874 928 ntBASIC21.26■□□□□ 0.99
Tnrc18Q80WC3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnrc18Q80WC3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnrc18Q80WC3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Tnrc18Q80WC3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnrc18Q80WC3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnrc18Q80WC3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnrc18Q80WC3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Tnrc18Q80WC3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnrc18Q80WC3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Tnrc18Q80WC3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tnrc18Q80WC3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnrc18Q80WC3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tnrc18Q80WC3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnrc18Q80WC3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.24■□□□□ 0.99
Tnrc18Q80WC3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tnrc18Q80WC3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnrc18Q80WC3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnrc18Q80WC3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
Tnrc18Q80WC3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
Tnrc18Q80WC3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tnrc18Q80WC3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.23■□□□□ 0.99
Tnrc18Q80WC3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tnrc18Q80WC3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.23■□□□□ 0.99
Tnrc18Q80WC3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnrc18Q80WC3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnrc18Q80WC3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnrc18Q80WC3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnrc18Q80WC3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.22■□□□□ 0.99
Tnrc18Q80WC3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Tnrc18Q80WC3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnrc18Q80WC3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnrc18Q80WC3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.22■□□□□ 0.99
Tnrc18Q80WC3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.21■□□□□ 0.99
Tnrc18Q80WC3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tnrc18Q80WC3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Tnrc18Q80WC3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnrc18Q80WC3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnrc18Q80WC3 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.21■□□□□ 0.99
Tnrc18Q80WC3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Tnrc18Q80WC3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Tnrc18Q80WC3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Tnrc18Q80WC3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnrc18Q80WC3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnrc18Q80WC3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnrc18Q80WC3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tnrc18Q80WC3 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.2■□□□□ 0.98
Tnrc18Q80WC3 Spcs1-204ENSMUST00000226782 949 ntBASIC21.2■□□□□ 0.98
Tnrc18Q80WC3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnrc18Q80WC3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnrc18Q80WC3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Gm43060-201ENSMUST00000200621 289 ntBASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.19■□□□□ 0.98
Tnrc18Q80WC3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.18■□□□□ 0.98
Tnrc18Q80WC3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.18■□□□□ 0.98
Tnrc18Q80WC3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnrc18Q80WC3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnrc18Q80WC3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Tnrc18Q80WC3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.18■□□□□ 0.98
Tnrc18Q80WC3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.18■□□□□ 0.98
Tnrc18Q80WC3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tnrc18Q80WC3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Tnrc18Q80WC3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnrc18Q80WC3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.17■□□□□ 0.98
Tnrc18Q80WC3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tnrc18Q80WC3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnrc18Q80WC3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Tnrc18Q80WC3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tnrc18Q80WC3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnrc18Q80WC3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnrc18Q80WC3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Tnrc18Q80WC3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Tnrc18Q80WC3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Tnrc18Q80WC3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnrc18Q80WC3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnrc18Q80WC3 Gm26833-201ENSMUST00000180899 440 ntBASIC21.16■□□□□ 0.98
Tnrc18Q80WC3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms