Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.5■□□□□ 0.71
Sox17Q61473 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sox17Q61473 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox17Q61473 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.5■□□□□ 0.71
Sox17Q61473 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox17Q61473 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Sox17Q61473 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sox17Q61473 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sox17Q61473 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox17Q61473 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sox17Q61473 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox17Q61473 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox17Q61473 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox17Q61473 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sox17Q61473 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox17Q61473 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox17Q61473 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox17Q61473 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox17Q61473 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox17Q61473 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.48■□□□□ 0.71
Sox17Q61473 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox17Q61473 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox17Q61473 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox17Q61473 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox17Q61473 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox17Q61473 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox17Q61473 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.47■□□□□ 0.71
Sox17Q61473 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Sox17Q61473 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox17Q61473 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox17Q61473 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.46■□□□□ 0.71
Sox17Q61473 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sox17Q61473 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox17Q61473 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox17Q61473 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.46■□□□□ 0.71
Sox17Q61473 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sox17Q61473 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox17Q61473 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sox17Q61473 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox17Q61473 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Sox17Q61473 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.45■□□□□ 0.7
Sox17Q61473 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.45■□□□□ 0.7
Sox17Q61473 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox17Q61473 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox17Q61473 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox17Q61473 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox17Q61473 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sox17Q61473 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sox17Q61473 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox17Q61473 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Sox17Q61473 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sox17Q61473 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox17Q61473 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.44■□□□□ 0.7
Sox17Q61473 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox17Q61473 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox17Q61473 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox17Q61473 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox17Q61473 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox17Q61473 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox17Q61473 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox17Q61473 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.43■□□□□ 0.7
Sox17Q61473 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox17Q61473 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox17Q61473 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox17Q61473 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox17Q61473 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox17Q61473 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox17Q61473 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Sox17Q61473 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.42■□□□□ 0.7
Sox17Q61473 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Sox17Q61473 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox17Q61473 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox17Q61473 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.42■□□□□ 0.7
Sox17Q61473 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox17Q61473 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox17Q61473 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox17Q61473 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.41■□□□□ 0.7
Sox17Q61473 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox17Q61473 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox17Q61473 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.41■□□□□ 0.7
Sox17Q61473 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox17Q61473 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox17Q61473 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Sox17Q61473 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox17Q61473 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox17Q61473 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox17Q61473 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms