Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.58■□□□□ 0.73
Ripk1Q60855 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ripk1Q60855 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.58■□□□□ 0.73
Ripk1Q60855 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ripk1Q60855 Gm13238-201ENSMUST00000117655 780 ntBASIC19.58■□□□□ 0.72
Ripk1Q60855 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ripk1Q60855 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.58■□□□□ 0.72
Ripk1Q60855 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ripk1Q60855 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ripk1Q60855 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ripk1Q60855 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ripk1Q60855 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.58■□□□□ 0.72
Ripk1Q60855 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ripk1Q60855 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ripk1Q60855 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ripk1Q60855 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ripk1Q60855 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Ripk1Q60855 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ripk1Q60855 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ripk1Q60855 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ripk1Q60855 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ripk1Q60855 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ripk1Q60855 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ripk1Q60855 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ripk1Q60855 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ripk1Q60855 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ripk1Q60855 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ripk1Q60855 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.54■□□□□ 0.72
Ripk1Q60855 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ripk1Q60855 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ripk1Q60855 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ripk1Q60855 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ripk1Q60855 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ripk1Q60855 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ripk1Q60855 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ripk1Q60855 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.53■□□□□ 0.72
Ripk1Q60855 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.53■□□□□ 0.72
Ripk1Q60855 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.53■□□□□ 0.72
Ripk1Q60855 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ripk1Q60855 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ripk1Q60855 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Ripk1Q60855 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ripk1Q60855 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ripk1Q60855 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ripk1Q60855 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ripk1Q60855 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ripk1Q60855 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ripk1Q60855 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ripk1Q60855 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Ripk1Q60855 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ripk1Q60855 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ripk1Q60855 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ripk1Q60855 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ripk1Q60855 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ripk1Q60855 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ripk1Q60855 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ripk1Q60855 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ripk1Q60855 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.51■□□□□ 0.71
Ripk1Q60855 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ripk1Q60855 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ripk1Q60855 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.5■□□□□ 0.71
Ripk1Q60855 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ripk1Q60855 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ripk1Q60855 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ripk1Q60855 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ripk1Q60855 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
Ripk1Q60855 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ripk1Q60855 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
Ripk1Q60855 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Ripk1Q60855 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ripk1Q60855 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ripk1Q60855 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ripk1Q60855 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.49■□□□□ 0.71
Ripk1Q60855 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ripk1Q60855 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ripk1Q60855 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ripk1Q60855 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.48■□□□□ 0.71
Ripk1Q60855 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ripk1Q60855 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ripk1Q60855 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ripk1Q60855 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ripk1Q60855 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ripk1Q60855 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.48■□□□□ 0.71
Ripk1Q60855 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ripk1Q60855 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ripk1Q60855 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ripk1Q60855 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ripk1Q60855 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.47■□□□□ 0.71
Ripk1Q60855 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ripk1Q60855 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk1Q60855 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk1Q60855 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ripk1Q60855 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk1Q60855 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ripk1Q60855 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk1Q60855 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk1Q60855 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Ripk1Q60855 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ripk1Q60855 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk1Q60855 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms