Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav8d-2Q5R1B6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav8d-2Q5R1B6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.55■□□□□ 0.88
Trav8d-2Q5R1B6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav8d-2Q5R1B6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.54■□□□□ 0.88
Trav8d-2Q5R1B6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav8d-2Q5R1B6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trav8d-2Q5R1B6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.54■□□□□ 0.88
Trav8d-2Q5R1B6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trav8d-2Q5R1B6 Gm42569-201ENSMUST00000200539 472 ntBASIC20.54■□□□□ 0.88
Trav8d-2Q5R1B6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav8d-2Q5R1B6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav8d-2Q5R1B6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav8d-2Q5R1B6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav8d-2Q5R1B6 Gm27405-201ENSMUST00000184201 112 ntBASIC20.53■□□□□ 0.88
Trav8d-2Q5R1B6 Gm43060-201ENSMUST00000200621 289 ntBASIC20.53■□□□□ 0.88
Trav8d-2Q5R1B6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav8d-2Q5R1B6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trav8d-2Q5R1B6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav8d-2Q5R1B6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav8d-2Q5R1B6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav8d-2Q5R1B6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.52■□□□□ 0.88
Trav8d-2Q5R1B6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav8d-2Q5R1B6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav8d-2Q5R1B6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav8d-2Q5R1B6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trav8d-2Q5R1B6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav8d-2Q5R1B6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav8d-2Q5R1B6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.51■□□□□ 0.87
Trav8d-2Q5R1B6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav8d-2Q5R1B6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Trav8d-2Q5R1B6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav8d-2Q5R1B6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trav8d-2Q5R1B6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.5■□□□□ 0.87
Trav8d-2Q5R1B6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Trav8d-2Q5R1B6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trav8d-2Q5R1B6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav8d-2Q5R1B6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav8d-2Q5R1B6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav8d-2Q5R1B6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav8d-2Q5R1B6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav8d-2Q5R1B6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Trav8d-2Q5R1B6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trav8d-2Q5R1B6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav8d-2Q5R1B6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav8d-2Q5R1B6 Spcs1-204ENSMUST00000226782 949 ntBASIC20.48■□□□□ 0.87
Trav8d-2Q5R1B6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trav8d-2Q5R1B6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav8d-2Q5R1B6 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.48■□□□□ 0.87
Trav8d-2Q5R1B6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav8d-2Q5R1B6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.48■□□□□ 0.87
Trav8d-2Q5R1B6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav8d-2Q5R1B6 Gm26571-201ENSMUST00000181399 666 ntBASIC20.47■□□□□ 0.87
Trav8d-2Q5R1B6 Gm42642-201ENSMUST00000200683 355 ntBASIC20.47■□□□□ 0.87
Trav8d-2Q5R1B6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trav8d-2Q5R1B6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.47■□□□□ 0.87
Trav8d-2Q5R1B6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav8d-2Q5R1B6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.47■□□□□ 0.87
Trav8d-2Q5R1B6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav8d-2Q5R1B6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trav8d-2Q5R1B6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav8d-2Q5R1B6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav8d-2Q5R1B6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav8d-2Q5R1B6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.46■□□□□ 0.87
Trav8d-2Q5R1B6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav8d-2Q5R1B6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav8d-2Q5R1B6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav8d-2Q5R1B6 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.45■□□□□ 0.86
Trav8d-2Q5R1B6 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.45■□□□□ 0.86
Trav8d-2Q5R1B6 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.45■□□□□ 0.86
Trav8d-2Q5R1B6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav8d-2Q5R1B6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav8d-2Q5R1B6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav8d-2Q5R1B6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.44■□□□□ 0.86
Trav8d-2Q5R1B6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8d-2Q5R1B6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8d-2Q5R1B6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trav8d-2Q5R1B6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8d-2Q5R1B6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav8d-2Q5R1B6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8d-2Q5R1B6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav8d-2Q5R1B6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8d-2Q5R1B6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8d-2Q5R1B6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8d-2Q5R1B6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms