Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim80Q3V061 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trim80Q3V061 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim80Q3V061 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim80Q3V061 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim80Q3V061 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim80Q3V061 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim80Q3V061 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim80Q3V061 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim80Q3V061 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Trim80Q3V061 Gm44428-201ENSMUST00000204474 874 ntBASIC21.24■□□□□ 0.99
Trim80Q3V061 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim80Q3V061 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim80Q3V061 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim80Q3V061 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim80Q3V061 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trim80Q3V061 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim80Q3V061 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim80Q3V061 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim80Q3V061 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.23■□□□□ 0.99
Trim80Q3V061 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim80Q3V061 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim80Q3V061 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.22■□□□□ 0.99
Trim80Q3V061 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim80Q3V061 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim80Q3V061 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim80Q3V061 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim80Q3V061 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim80Q3V061 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim80Q3V061 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.21■□□□□ 0.99
Trim80Q3V061 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim80Q3V061 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim80Q3V061 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim80Q3V061 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.21■□□□□ 0.99
Trim80Q3V061 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim80Q3V061 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim80Q3V061 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.2■□□□□ 0.98
Trim80Q3V061 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim80Q3V061 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim80Q3V061 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim80Q3V061 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim80Q3V061 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim80Q3V061 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trim80Q3V061 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim80Q3V061 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim80Q3V061 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim80Q3V061 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim80Q3V061 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim80Q3V061 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim80Q3V061 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.19■□□□□ 0.98
Trim80Q3V061 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim80Q3V061 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.19■□□□□ 0.98
Trim80Q3V061 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim80Q3V061 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim80Q3V061 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim80Q3V061 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim80Q3V061 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim80Q3V061 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim80Q3V061 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim80Q3V061 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim80Q3V061 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim80Q3V061 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim80Q3V061 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim80Q3V061 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim80Q3V061 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim80Q3V061 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trim80Q3V061 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim80Q3V061 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim80Q3V061 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.16■□□□□ 0.98
Trim80Q3V061 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.16■□□□□ 0.98
Trim80Q3V061 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim80Q3V061 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim80Q3V061 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim80Q3V061 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim80Q3V061 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim80Q3V061 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim80Q3V061 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim80Q3V061 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim80Q3V061 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim80Q3V061 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim80Q3V061 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim80Q3V061 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim80Q3V061 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim80Q3V061 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.15■□□□□ 0.98
Trim80Q3V061 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim80Q3V061 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.14■□□□□ 0.98
Trim80Q3V061 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim80Q3V061 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim80Q3V061 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim80Q3V061 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim80Q3V061 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim80Q3V061 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim80Q3V061 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim80Q3V061 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim80Q3V061 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.13■□□□□ 0.97
Trim80Q3V061 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim80Q3V061 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim80Q3V061 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trim80Q3V061 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim80Q3V061 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms