Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q3KNL4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.35■□□□□ 0.85
Q3KNL4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.35■□□□□ 0.85
Q3KNL4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.35■□□□□ 0.85
Q3KNL4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.35■□□□□ 0.85
Q3KNL4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q3KNL4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Q3KNL4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q3KNL4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Q3KNL4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Q3KNL4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Q3KNL4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Q3KNL4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Q3KNL4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q3KNL4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q3KNL4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q3KNL4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q3KNL4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q3KNL4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q3KNL4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Q3KNL4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q3KNL4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q3KNL4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Q3KNL4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q3KNL4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Q3KNL4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.33■□□□□ 0.84
Q3KNL4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q3KNL4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q3KNL4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q3KNL4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q3KNL4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q3KNL4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
Q3KNL4 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.32■□□□□ 0.84
Q3KNL4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q3KNL4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q3KNL4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q3KNL4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q3KNL4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.32■□□□□ 0.84
Q3KNL4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.32■□□□□ 0.84
Q3KNL4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q3KNL4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q3KNL4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q3KNL4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q3KNL4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q3KNL4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.31■□□□□ 0.84
Q3KNL4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q3KNL4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Q3KNL4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q3KNL4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q3KNL4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Q3KNL4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q3KNL4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q3KNL4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q3KNL4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Q3KNL4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q3KNL4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Q3KNL4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.3■□□□□ 0.84
Q3KNL4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Q3KNL4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q3KNL4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.29■□□□□ 0.84
Q3KNL4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Q3KNL4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Q3KNL4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q3KNL4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.28■□□□□ 0.84
Q3KNL4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q3KNL4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q3KNL4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q3KNL4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q3KNL4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Q3KNL4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.28■□□□□ 0.84
Q3KNL4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q3KNL4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q3KNL4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q3KNL4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q3KNL4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q3KNL4 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.27■□□□□ 0.84
Q3KNL4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q3KNL4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q3KNL4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Q3KNL4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Q3KNL4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Q3KNL4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q3KNL4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q3KNL4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Q3KNL4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q3KNL4 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.26■□□□□ 0.83
Q3KNL4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Q3KNL4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Q3KNL4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Q3KNL4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Q3KNL4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q3KNL4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q3KNL4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Q3KNL4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q3KNL4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q3KNL4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q3KNL4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q3KNL4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.24■□□□□ 0.83
Q3KNL4 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.24■□□□□ 0.83
Q3KNL4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms