Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1bP97952 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Scn1bP97952 Mir3960-201ENSMUST00000198213 73 ntBASIC18.88■□□□□ 0.61
Scn1bP97952 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Scn1bP97952 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1bP97952 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1bP97952 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1bP97952 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.88■□□□□ 0.61
Scn1bP97952 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1bP97952 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.87■□□□□ 0.61
Scn1bP97952 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Scn1bP97952 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Scn1bP97952 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1bP97952 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Scn1bP97952 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1bP97952 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1bP97952 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1bP97952 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1bP97952 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn1bP97952 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.86■□□□□ 0.61
Scn1bP97952 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Scn1bP97952 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Scn1bP97952 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn1bP97952 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.86■□□□□ 0.61
Scn1bP97952 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1bP97952 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.85■□□□□ 0.61
Scn1bP97952 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1bP97952 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1bP97952 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1bP97952 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1bP97952 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1bP97952 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Scn1bP97952 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scn1bP97952 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1bP97952 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1bP97952 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scn1bP97952 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1bP97952 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1bP97952 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1bP97952 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1bP97952 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1bP97952 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1bP97952 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.84■□□□□ 0.61
Scn1bP97952 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1bP97952 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.84■□□□□ 0.61
Scn1bP97952 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1bP97952 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn1bP97952 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn1bP97952 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.83■□□□□ 0.61
Scn1bP97952 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Scn1bP97952 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1bP97952 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1bP97952 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1bP97952 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1bP97952 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1bP97952 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1bP97952 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1bP97952 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1bP97952 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1bP97952 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1bP97952 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1bP97952 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1bP97952 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1bP97952 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scn1bP97952 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1bP97952 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.81■□□□□ 0.6
Scn1bP97952 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1bP97952 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1bP97952 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scn1bP97952 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.81■□□□□ 0.6
Scn1bP97952 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1bP97952 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1bP97952 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1bP97952 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1bP97952 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1bP97952 Gm9812-201ENSMUST00000061934 968 ntBASIC18.8■□□□□ 0.6
Scn1bP97952 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1bP97952 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1bP97952 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Scn1bP97952 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1bP97952 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1bP97952 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scn1bP97952 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1bP97952 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1bP97952 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.79■□□□□ 0.6
Scn1bP97952 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1bP97952 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1bP97952 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1bP97952 Gm45364-201ENSMUST00000210883 159 ntBASIC18.79■□□□□ 0.6
Scn1bP97952 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.79■□□□□ 0.6
Scn1bP97952 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1bP97952 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.79■□□□□ 0.6
Scn1bP97952 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.79■□□□□ 0.6
Scn1bP97952 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1bP97952 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1bP97952 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Scn1bP97952 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1bP97952 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1bP97952 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1bP97952 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms