Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.68■□□□□ 0.9
Fdft1P53798 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Fdft1P53798 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Fdft1P53798 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Fdft1P53798 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Fdft1P53798 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fdft1P53798 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fdft1P53798 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fdft1P53798 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fdft1P53798 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Fdft1P53798 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fdft1P53798 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.67■□□□□ 0.9
Fdft1P53798 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fdft1P53798 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fdft1P53798 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.66■□□□□ 0.9
Fdft1P53798 Gm45444-201ENSMUST00000211394 898 ntBASIC20.66■□□□□ 0.9
Fdft1P53798 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fdft1P53798 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Fdft1P53798 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fdft1P53798 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Fdft1P53798 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fdft1P53798 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fdft1P53798 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fdft1P53798 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fdft1P53798 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Fdft1P53798 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Fdft1P53798 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fdft1P53798 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fdft1P53798 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Fdft1P53798 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fdft1P53798 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.65■□□□□ 0.9
Fdft1P53798 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fdft1P53798 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fdft1P53798 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.65■□□□□ 0.9
Fdft1P53798 Gm5921-201ENSMUST00000075898 882 ntBASIC20.65■□□□□ 0.9
Fdft1P53798 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fdft1P53798 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fdft1P53798 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fdft1P53798 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Fdft1P53798 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.64■□□□□ 0.9
Fdft1P53798 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Fdft1P53798 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Fdft1P53798 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Fdft1P53798 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Fdft1P53798 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Fdft1P53798 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Fdft1P53798 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Fdft1P53798 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Fdft1P53798 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Fdft1P53798 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Fdft1P53798 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.64■□□□□ 0.89
Fdft1P53798 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Fdft1P53798 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Fdft1P53798 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.63■□□□□ 0.89
Fdft1P53798 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fdft1P53798 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fdft1P53798 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fdft1P53798 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Fdft1P53798 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fdft1P53798 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Fdft1P53798 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Fdft1P53798 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fdft1P53798 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Fdft1P53798 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fdft1P53798 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.61■□□□□ 0.89
Fdft1P53798 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Fdft1P53798 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fdft1P53798 Gm13238-201ENSMUST00000117655 780 ntBASIC20.61■□□□□ 0.89
Fdft1P53798 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.61■□□□□ 0.89
Fdft1P53798 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.61■□□□□ 0.89
Fdft1P53798 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Fdft1P53798 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Fdft1P53798 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.6■□□□□ 0.89
Fdft1P53798 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fdft1P53798 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Fdft1P53798 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fdft1P53798 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.6■□□□□ 0.89
Fdft1P53798 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fdft1P53798 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fdft1P53798 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fdft1P53798 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fdft1P53798 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Fdft1P53798 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fdft1P53798 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fdft1P53798 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fdft1P53798 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fdft1P53798 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fdft1P53798 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fdft1P53798 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fdft1P53798 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 359.4 ms