Protein–RNA interactions for Protein: P47774

Ccr7, C-C chemokine receptor type 7, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr7P47774 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccr7P47774 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr7P47774 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.66■□□□□ 0.9
Ccr7P47774 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr7P47774 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr7P47774 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr7P47774 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccr7P47774 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr7P47774 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr7P47774 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.65■□□□□ 0.9
Ccr7P47774 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccr7P47774 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr7P47774 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Ccr7P47774 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.65■□□□□ 0.9
Ccr7P47774 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccr7P47774 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr7P47774 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr7P47774 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccr7P47774 Gm22238-201ENSMUST00000175222 88 ntBASIC20.64■□□□□ 0.89
Ccr7P47774 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.64■□□□□ 0.89
Ccr7P47774 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccr7P47774 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccr7P47774 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccr7P47774 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccr7P47774 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccr7P47774 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccr7P47774 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccr7P47774 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccr7P47774 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccr7P47774 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccr7P47774 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccr7P47774 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccr7P47774 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Ccr7P47774 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr7P47774 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccr7P47774 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccr7P47774 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr7P47774 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr7P47774 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr7P47774 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccr7P47774 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccr7P47774 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.6■□□□□ 0.89
Ccr7P47774 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
Ccr7P47774 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ccr7P47774 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccr7P47774 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccr7P47774 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccr7P47774 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccr7P47774 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccr7P47774 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccr7P47774 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccr7P47774 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccr7P47774 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccr7P47774 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.59■□□□□ 0.89
Ccr7P47774 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr7P47774 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.58■□□□□ 0.89
Ccr7P47774 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr7P47774 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.58■□□□□ 0.89
Ccr7P47774 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr7P47774 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr7P47774 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr7P47774 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr7P47774 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccr7P47774 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr7P47774 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr7P47774 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr7P47774 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr7P47774 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr7P47774 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr7P47774 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr7P47774 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr7P47774 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr7P47774 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr7P47774 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Ccr7P47774 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccr7P47774 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccr7P47774 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccr7P47774 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.56■□□□□ 0.88
Ccr7P47774 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccr7P47774 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccr7P47774 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccr7P47774 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccr7P47774 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccr7P47774 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccr7P47774 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccr7P47774 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccr7P47774 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
Ccr7P47774 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ccr7P47774 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr7P47774 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr7P47774 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr7P47774 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccr7P47774 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr7P47774 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr7P47774 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.53■□□□□ 0.88
Ccr7P47774 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr7P47774 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr7P47774 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccr7P47774 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr7P47774 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms