Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HmgclP38060 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.58■□□□□ 0.89
HmgclP38060 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.58■□□□□ 0.88
HmgclP38060 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HmgclP38060 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.57■□□□□ 0.88
HmgclP38060 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HmgclP38060 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HmgclP38060 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HmgclP38060 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HmgclP38060 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HmgclP38060 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HmgclP38060 Gm15546-201ENSMUST00000122095 826 ntBASIC20.56■□□□□ 0.88
HmgclP38060 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HmgclP38060 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HmgclP38060 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HmgclP38060 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HmgclP38060 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HmgclP38060 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.55■□□□□ 0.88
HmgclP38060 Gm15820-201ENSMUST00000201566 728 ntBASIC20.55■□□□□ 0.88
HmgclP38060 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HmgclP38060 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.54■□□□□ 0.88
HmgclP38060 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HmgclP38060 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HmgclP38060 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HmgclP38060 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HmgclP38060 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HmgclP38060 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HmgclP38060 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HmgclP38060 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
HmgclP38060 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HmgclP38060 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.53■□□□□ 0.88
HmgclP38060 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HmgclP38060 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HmgclP38060 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HmgclP38060 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HmgclP38060 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.53■□□□□ 0.88
HmgclP38060 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HmgclP38060 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HmgclP38060 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HmgclP38060 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HmgclP38060 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HmgclP38060 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.52■□□□□ 0.88
HmgclP38060 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HmgclP38060 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HmgclP38060 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
HmgclP38060 Gm40881-201ENSMUST00000223397 166 ntBASIC20.51■□□□□ 0.87
HmgclP38060 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
HmgclP38060 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HmgclP38060 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HmgclP38060 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HmgclP38060 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HmgclP38060 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HmgclP38060 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.5■□□□□ 0.87
HmgclP38060 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.5■□□□□ 0.87
HmgclP38060 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HmgclP38060 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HmgclP38060 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HmgclP38060 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HmgclP38060 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HmgclP38060 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HmgclP38060 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HmgclP38060 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.49■□□□□ 0.87
HmgclP38060 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HmgclP38060 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HmgclP38060 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HmgclP38060 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HmgclP38060 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HmgclP38060 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.48■□□□□ 0.87
HmgclP38060 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HmgclP38060 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HmgclP38060 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HmgclP38060 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.48■□□□□ 0.87
HmgclP38060 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HmgclP38060 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.48■□□□□ 0.87
HmgclP38060 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HmgclP38060 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HmgclP38060 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HmgclP38060 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.48■□□□□ 0.87
HmgclP38060 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HmgclP38060 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HmgclP38060 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HmgclP38060 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HmgclP38060 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.47■□□□□ 0.87
HmgclP38060 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HmgclP38060 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HmgclP38060 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HmgclP38060 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HmgclP38060 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HmgclP38060 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HmgclP38060 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HmgclP38060 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HmgclP38060 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HmgclP38060 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HmgclP38060 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.45■□□□□ 0.86
HmgclP38060 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HmgclP38060 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HmgclP38060 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HmgclP38060 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HmgclP38060 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HmgclP38060 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms