Protein–RNA interactions for Protein: P33434

Mmp2, 72 kDa type IV collagenase, mousemouse

Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp2P33434 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.36■□□□□ 0.69
Mmp2P33434 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp2P33434 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp2P33434 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp2P33434 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Mmp2P33434 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp2P33434 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp2P33434 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Mmp2P33434 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.35■□□□□ 0.69
Mmp2P33434 Gm40881-201ENSMUST00000223397 166 ntBASIC19.35■□□□□ 0.69
Mmp2P33434 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp2P33434 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp2P33434 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp2P33434 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp2P33434 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Mmp2P33434 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp2P33434 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.34■□□□□ 0.69
Mmp2P33434 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Mmp2P33434 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Mmp2P33434 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.34■□□□□ 0.69
Mmp2P33434 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp2P33434 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp2P33434 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.34■□□□□ 0.69
Mmp2P33434 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp2P33434 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.34■□□□□ 0.69
Mmp2P33434 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp2P33434 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Mmp2P33434 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp2P33434 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp2P33434 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp2P33434 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp2P33434 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.33■□□□□ 0.68
Mmp2P33434 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp2P33434 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp2P33434 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp2P33434 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp2P33434 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Mmp2P33434 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Mmp2P33434 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp2P33434 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp2P33434 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.31■□□□□ 0.68
Mmp2P33434 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp2P33434 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp2P33434 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp2P33434 Gm14117-201ENSMUST00000122417 843 ntBASIC19.31■□□□□ 0.68
Mmp2P33434 Gm45102-201ENSMUST00000207427 857 ntBASIC19.31■□□□□ 0.68
Mmp2P33434 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Mmp2P33434 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp2P33434 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp2P33434 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp2P33434 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp2P33434 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp2P33434 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp2P33434 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.29■□□□□ 0.68
Mmp2P33434 Etf1-202ENSMUST00000180351 108 ntBASIC19.29■□□□□ 0.68
Mmp2P33434 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.29■□□□□ 0.68
Mmp2P33434 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp2P33434 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp2P33434 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Mmp2P33434 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp2P33434 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp2P33434 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp2P33434 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp2P33434 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp2P33434 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Mmp2P33434 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp2P33434 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp2P33434 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp2P33434 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp2P33434 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Mmp2P33434 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.27■□□□□ 0.68
Mmp2P33434 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp2P33434 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp2P33434 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp2P33434 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp2P33434 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp2P33434 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.26■□□□□ 0.67
Mmp2P33434 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp2P33434 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp2P33434 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp2P33434 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.25■□□□□ 0.67
Mmp2P33434 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.25■□□□□ 0.67
Mmp2P33434 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp2P33434 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
Mmp2P33434 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Mmp2P33434 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp2P33434 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp2P33434 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp2P33434 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp2P33434 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp2P33434 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Mmp2P33434 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.24■□□□□ 0.67
Mmp2P33434 Gm7417-201ENSMUST00000192950 473 ntBASIC19.24■□□□□ 0.67
Mmp2P33434 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp2P33434 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Mmp2P33434 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Mmp2P33434 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp2P33434 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp2P33434 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp2P33434 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms