Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Tnfrsf1bP25119 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tnfrsf1bP25119 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.27■□□□□ 0.67
Tnfrsf1bP25119 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tnfrsf1bP25119 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1bP25119 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1bP25119 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tnfrsf1bP25119 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1bP25119 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1bP25119 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1bP25119 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1bP25119 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tnfrsf1bP25119 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1bP25119 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1bP25119 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1bP25119 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1bP25119 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.24■□□□□ 0.67
Tnfrsf1bP25119 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1bP25119 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf1bP25119 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf1bP25119 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf1bP25119 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tnfrsf1bP25119 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.23■□□□□ 0.67
Tnfrsf1bP25119 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tnfrsf1bP25119 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf1bP25119 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfrsf1bP25119 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.22■□□□□ 0.67
Tnfrsf1bP25119 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf1bP25119 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfrsf1bP25119 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf1bP25119 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf1bP25119 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.22■□□□□ 0.67
Tnfrsf1bP25119 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf1bP25119 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf1bP25119 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf1bP25119 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf1bP25119 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.21■□□□□ 0.67
Tnfrsf1bP25119 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf1bP25119 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf1bP25119 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf1bP25119 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf1bP25119 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1bP25119 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1bP25119 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1bP25119 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.2■□□□□ 0.66
Tnfrsf1bP25119 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1bP25119 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tnfrsf1bP25119 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1bP25119 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1bP25119 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1bP25119 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Tnfrsf1bP25119 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1bP25119 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.19■□□□□ 0.66
Tnfrsf1bP25119 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1bP25119 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1bP25119 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1bP25119 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1bP25119 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1bP25119 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1bP25119 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1bP25119 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1bP25119 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tnfrsf1bP25119 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tnfrsf1bP25119 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.18■□□□□ 0.66
Tnfrsf1bP25119 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1bP25119 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1bP25119 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.18■□□□□ 0.66
Tnfrsf1bP25119 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.17■□□□□ 0.66
Tnfrsf1bP25119 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf1bP25119 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.17■□□□□ 0.66
Tnfrsf1bP25119 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf1bP25119 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf1bP25119 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Tnfrsf1bP25119 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf1bP25119 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms