Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa1P09022 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.89■□□□□ 0.29
Hoxa1P09022 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Hoxa1P09022 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hoxa1P09022 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa1P09022 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa1P09022 Gm10420-201ENSMUST00000121713 882 ntBASIC16.88■□□□□ 0.29
Hoxa1P09022 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa1P09022 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa1P09022 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa1P09022 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hoxa1P09022 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa1P09022 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa1P09022 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa1P09022 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.87■□□□□ 0.29
Hoxa1P09022 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Hoxa1P09022 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa1P09022 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa1P09022 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa1P09022 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa1P09022 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa1P09022 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa1P09022 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa1P09022 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa1P09022 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Hoxa1P09022 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa1P09022 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa1P09022 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.86■□□□□ 0.29
Hoxa1P09022 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa1P09022 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa1P09022 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa1P09022 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa1P09022 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa1P09022 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa1P09022 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa1P09022 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Hoxa1P09022 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.85■□□□□ 0.29
Hoxa1P09022 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hoxa1P09022 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa1P09022 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hoxa1P09022 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa1P09022 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa1P09022 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.85■□□□□ 0.29
Hoxa1P09022 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa1P09022 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hoxa1P09022 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa1P09022 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa1P09022 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa1P09022 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa1P09022 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa1P09022 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Hoxa1P09022 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.84■□□□□ 0.29
Hoxa1P09022 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa1P09022 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hoxa1P09022 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa1P09022 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hoxa1P09022 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa1P09022 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Hoxa1P09022 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa1P09022 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hoxa1P09022 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxa1P09022 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxa1P09022 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa1P09022 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.83■□□□□ 0.28
Hoxa1P09022 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa1P09022 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.83■□□□□ 0.28
Hoxa1P09022 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa1P09022 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hoxa1P09022 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa1P09022 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.82■□□□□ 0.28
Hoxa1P09022 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa1P09022 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa1P09022 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa1P09022 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa1P09022 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa1P09022 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa1P09022 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa1P09022 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.82■□□□□ 0.28
Hoxa1P09022 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa1P09022 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa1P09022 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa1P09022 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa1P09022 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa1P09022 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa1P09022 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.81■□□□□ 0.28
Hoxa1P09022 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa1P09022 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa1P09022 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa1P09022 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Hoxa1P09022 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa1P09022 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hoxa1P09022 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa1P09022 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa1P09022 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa1P09022 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.8■□□□□ 0.28
Hoxa1P09022 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hoxa1P09022 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hoxa1P09022 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa1P09022 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa1P09022 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms