Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.66■□□□□ 0.74
ApoeP08226 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ApoeP08226 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ApoeP08226 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ApoeP08226 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
ApoeP08226 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.64■□□□□ 0.73
ApoeP08226 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ApoeP08226 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ApoeP08226 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ApoeP08226 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ApoeP08226 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ApoeP08226 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ApoeP08226 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ApoeP08226 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.63■□□□□ 0.73
ApoeP08226 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ApoeP08226 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ApoeP08226 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ApoeP08226 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ApoeP08226 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ApoeP08226 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ApoeP08226 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ApoeP08226 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ApoeP08226 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ApoeP08226 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ApoeP08226 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ApoeP08226 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.62■□□□□ 0.73
ApoeP08226 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ApoeP08226 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ApoeP08226 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ApoeP08226 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ApoeP08226 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ApoeP08226 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ApoeP08226 Gm6311-201ENSMUST00000073790 878 ntBASIC19.61■□□□□ 0.73
ApoeP08226 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ApoeP08226 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ApoeP08226 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ApoeP08226 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ApoeP08226 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.6■□□□□ 0.73
ApoeP08226 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.6■□□□□ 0.73
ApoeP08226 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ApoeP08226 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ApoeP08226 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ApoeP08226 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ApoeP08226 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ApoeP08226 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ApoeP08226 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ApoeP08226 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ApoeP08226 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.58■□□□□ 0.73
ApoeP08226 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ApoeP08226 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ApoeP08226 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ApoeP08226 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ApoeP08226 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ApoeP08226 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.58■□□□□ 0.72
ApoeP08226 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ApoeP08226 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ApoeP08226 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ApoeP08226 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ApoeP08226 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.58■□□□□ 0.72
ApoeP08226 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ApoeP08226 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ApoeP08226 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ApoeP08226 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ApoeP08226 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.57■□□□□ 0.72
ApoeP08226 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.57■□□□□ 0.72
ApoeP08226 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ApoeP08226 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ApoeP08226 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ApoeP08226 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ApoeP08226 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ApoeP08226 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.56■□□□□ 0.72
ApoeP08226 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.56■□□□□ 0.72
ApoeP08226 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ApoeP08226 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.56■□□□□ 0.72
ApoeP08226 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ApoeP08226 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ApoeP08226 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms