Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01852 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.98■□□□□ 0.63
P01852 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01852 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
P01852 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
P01852 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01852 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P01852 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
P01852 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.97■□□□□ 0.63
P01852 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01852 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.96■□□□□ 0.63
P01852 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01852 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01852 Gm7417-201ENSMUST00000192950 473 ntBASIC18.96■□□□□ 0.63
P01852 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P01852 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01852 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01852 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
P01852 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01852 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01852 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.95■□□□□ 0.62
P01852 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.95■□□□□ 0.62
P01852 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.95■□□□□ 0.62
P01852 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01852 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01852 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01852 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.94■□□□□ 0.62
P01852 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01852 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.94■□□□□ 0.62
P01852 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01852 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.93■□□□□ 0.62
P01852 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.93■□□□□ 0.62
P01852 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01852 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01852 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01852 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
P01852 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01852 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
P01852 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01852 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01852 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.92■□□□□ 0.62
P01852 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01852 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.92■□□□□ 0.62
P01852 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01852 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01852 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01852 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01852 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01852 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
P01852 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P01852 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
P01852 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.91■□□□□ 0.62
P01852 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P01852 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P01852 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.91■□□□□ 0.62
P01852 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01852 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
P01852 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01852 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01852 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
P01852 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
P01852 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P01852 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.9■□□□□ 0.62
P01852 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01852 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01852 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01852 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01852 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
P01852 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.89■□□□□ 0.61
P01852 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01852 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01852 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01852 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
P01852 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01852 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
P01852 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01852 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.88■□□□□ 0.61
P01852 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01852 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
P01852 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01852 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01852 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01852 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01852 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
P01852 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.87■□□□□ 0.61
P01852 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01852 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.87■□□□□ 0.61
P01852 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01852 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01852 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01852 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01852 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01852 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
P01852 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.86■□□□□ 0.61
P01852 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01852 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
P01852 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01852 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01852 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P01852 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 173.8 ms