Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.61□□□□□ -0.07
Sh2d1aO88890 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sh2d1aO88890 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Sh2d1aO88890 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2d1aO88890 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2d1aO88890 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2d1aO88890 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2d1aO88890 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2d1aO88890 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2d1aO88890 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.6□□□□□ -0.07
Sh2d1aO88890 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2d1aO88890 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2d1aO88890 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.6□□□□□ -0.07
Sh2d1aO88890 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Sh2d1aO88890 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2d1aO88890 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Sh2d1aO88890 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.59□□□□□ -0.07
Sh2d1aO88890 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Sh2d1aO88890 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Sh2d1aO88890 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh2d1aO88890 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2d1aO88890 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.58□□□□□ -0.08
Sh2d1aO88890 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2d1aO88890 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2d1aO88890 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2d1aO88890 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sh2d1aO88890 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2d1aO88890 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2d1aO88890 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2d1aO88890 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2d1aO88890 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2d1aO88890 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2d1aO88890 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2d1aO88890 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.57□□□□□ -0.08
Sh2d1aO88890 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2d1aO88890 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Sh2d1aO88890 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2d1aO88890 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2d1aO88890 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2d1aO88890 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2d1aO88890 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2d1aO88890 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2d1aO88890 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2d1aO88890 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.56□□□□□ -0.08
Sh2d1aO88890 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Sh2d1aO88890 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2d1aO88890 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.55□□□□□ -0.08
Sh2d1aO88890 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d1aO88890 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.54□□□□□ -0.08
Sh2d1aO88890 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.54□□□□□ -0.08
Sh2d1aO88890 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh2d1aO88890 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d1aO88890 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms