Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Vti1bO88384 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Vti1bO88384 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1bO88384 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.68■□□□□ 0.74
Vti1bO88384 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1bO88384 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Vti1bO88384 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1bO88384 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1bO88384 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1bO88384 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.68■□□□□ 0.74
Vti1bO88384 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.68■□□□□ 0.74
Vti1bO88384 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.68■□□□□ 0.74
Vti1bO88384 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1bO88384 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.68■□□□□ 0.74
Vti1bO88384 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Vti1bO88384 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1bO88384 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1bO88384 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vti1bO88384 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.67■□□□□ 0.74
Vti1bO88384 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.67■□□□□ 0.74
Vti1bO88384 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1bO88384 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1bO88384 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1bO88384 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.67■□□□□ 0.74
Vti1bO88384 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Vti1bO88384 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1bO88384 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1bO88384 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1bO88384 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.66■□□□□ 0.74
Vti1bO88384 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1bO88384 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1bO88384 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1bO88384 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1bO88384 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.65■□□□□ 0.74
Vti1bO88384 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.65■□□□□ 0.74
Vti1bO88384 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.65■□□□□ 0.74
Vti1bO88384 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1bO88384 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1bO88384 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1bO88384 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vti1bO88384 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1bO88384 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1bO88384 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.64■□□□□ 0.73
Vti1bO88384 Gm5921-201ENSMUST00000075898 882 ntBASIC19.64■□□□□ 0.73
Vti1bO88384 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1bO88384 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1bO88384 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1bO88384 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1bO88384 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Vti1bO88384 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Vti1bO88384 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1bO88384 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.63■□□□□ 0.73
Vti1bO88384 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1bO88384 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Vti1bO88384 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1bO88384 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1bO88384 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.62■□□□□ 0.73
Vti1bO88384 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.62■□□□□ 0.73
Vti1bO88384 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.62■□□□□ 0.73
Vti1bO88384 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.62■□□□□ 0.73
Vti1bO88384 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1bO88384 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.62■□□□□ 0.73
Vti1bO88384 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1bO88384 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Vti1bO88384 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1bO88384 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1bO88384 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1bO88384 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1bO88384 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1bO88384 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.61■□□□□ 0.73
Vti1bO88384 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1bO88384 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1bO88384 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1bO88384 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Vti1bO88384 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1bO88384 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1bO88384 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1bO88384 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1bO88384 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1bO88384 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1bO88384 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Vti1bO88384 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.59■□□□□ 0.73
Vti1bO88384 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1bO88384 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1bO88384 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1bO88384 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1bO88384 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1bO88384 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vti1bO88384 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vti1bO88384 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vti1bO88384 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vti1bO88384 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.58■□□□□ 0.73
Vti1bO88384 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vti1bO88384 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Vti1bO88384 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vti1bO88384 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vti1bO88384 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.58■□□□□ 0.72
Vti1bO88384 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.58■□□□□ 0.72
Vti1bO88384 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vti1bO88384 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms