Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Abca4O35600 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.05■□□□□ 0.8
Abca4O35600 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.05■□□□□ 0.8
Abca4O35600 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abca4O35600 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Abca4O35600 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.04■□□□□ 0.8
Abca4O35600 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Abca4O35600 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Abca4O35600 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Abca4O35600 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abca4O35600 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.04■□□□□ 0.8
Abca4O35600 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Abca4O35600 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.04■□□□□ 0.8
Abca4O35600 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abca4O35600 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abca4O35600 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
Abca4O35600 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Abca4O35600 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
Abca4O35600 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abca4O35600 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abca4O35600 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Abca4O35600 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Abca4O35600 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.02■□□□□ 0.8
Abca4O35600 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Abca4O35600 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abca4O35600 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Abca4O35600 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
Abca4O35600 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abca4O35600 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abca4O35600 Gm12527-201ENSMUST00000117967 564 ntBASIC20.01■□□□□ 0.79
Abca4O35600 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Abca4O35600 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.01■□□□□ 0.79
Abca4O35600 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abca4O35600 Gm4968-201ENSMUST00000071458 858 ntBASIC20.01■□□□□ 0.79
Abca4O35600 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abca4O35600 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.01■□□□□ 0.79
Abca4O35600 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.01■□□□□ 0.79
Abca4O35600 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abca4O35600 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Abca4O35600 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Abca4O35600 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Abca4O35600 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20■□□□□ 0.79
Abca4O35600 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20■□□□□ 0.79
Abca4O35600 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Abca4O35600 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abca4O35600 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.99■□□□□ 0.79
Abca4O35600 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abca4O35600 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abca4O35600 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abca4O35600 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abca4O35600 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Abca4O35600 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abca4O35600 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abca4O35600 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abca4O35600 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abca4O35600 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abca4O35600 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Abca4O35600 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.98■□□□□ 0.79
Abca4O35600 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Abca4O35600 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abca4O35600 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abca4O35600 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abca4O35600 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abca4O35600 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abca4O35600 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Abca4O35600 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Abca4O35600 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.97■□□□□ 0.79
Abca4O35600 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abca4O35600 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Abca4O35600 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abca4O35600 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Abca4O35600 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Abca4O35600 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Abca4O35600 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abca4O35600 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abca4O35600 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Abca4O35600 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abca4O35600 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Abca4O35600 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abca4O35600 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Abca4O35600 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abca4O35600 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.96■□□□□ 0.79
Abca4O35600 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abca4O35600 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abca4O35600 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Abca4O35600 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abca4O35600 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Abca4O35600 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.95■□□□□ 0.78
Abca4O35600 Gm20760-201ENSMUST00000179197 648 ntBASIC19.94■□□□□ 0.78
Abca4O35600 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abca4O35600 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Abca4O35600 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abca4O35600 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Abca4O35600 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abca4O35600 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abca4O35600 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Abca4O35600 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.93■□□□□ 0.78
Abca4O35600 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.93■□□□□ 0.78
Abca4O35600 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abca4O35600 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms