Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gm11127A7VMS2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11127A7VMS2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11127A7VMS2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11127A7VMS2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gm11127A7VMS2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm11127A7VMS2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm11127A7VMS2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm11127A7VMS2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm11127A7VMS2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm11127A7VMS2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm11127A7VMS2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Gm27502-201ENSMUST00000183495 199 ntBASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11127A7VMS2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm11127A7VMS2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11127A7VMS2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Gm11127A7VMS2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11127A7VMS2 Gm11175-201ENSMUST00000116172 543 ntBASIC18.22■□□□□ 0.51
Gm11127A7VMS2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11127A7VMS2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm11127A7VMS2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.22■□□□□ 0.51
Gm11127A7VMS2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11127A7VMS2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11127A7VMS2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11127A7VMS2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11127A7VMS2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11127A7VMS2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11127A7VMS2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11127A7VMS2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11127A7VMS2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm11127A7VMS2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11127A7VMS2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11127A7VMS2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11127A7VMS2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11127A7VMS2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11127A7VMS2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11127A7VMS2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.2■□□□□ 0.5
Gm11127A7VMS2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.2■□□□□ 0.5
Gm11127A7VMS2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11127A7VMS2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11127A7VMS2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11127A7VMS2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11127A7VMS2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11127A7VMS2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.19■□□□□ 0.5
Gm11127A7VMS2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11127A7VMS2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11127A7VMS2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11127A7VMS2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.19■□□□□ 0.5
Gm11127A7VMS2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.19■□□□□ 0.5
Gm11127A7VMS2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm11127A7VMS2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm11127A7VMS2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11127A7VMS2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11127A7VMS2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11127A7VMS2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11127A7VMS2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11127A7VMS2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11127A7VMS2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11127A7VMS2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gm11127A7VMS2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11127A7VMS2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11127A7VMS2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11127A7VMS2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11127A7VMS2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.17■□□□□ 0.5
Gm11127A7VMS2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11127A7VMS2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11127A7VMS2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Gm11127A7VMS2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11127A7VMS2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11127A7VMS2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11127A7VMS2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11127A7VMS2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11127A7VMS2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11127A7VMS2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11127A7VMS2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11127A7VMS2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms