Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
Frmpd3A0A140LIW3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Frmpd3A0A140LIW3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Frmpd3A0A140LIW3 Gm40848-201ENSMUST00000221998 324 ntBASIC25.49■■□□□ 1.67
Frmpd3A0A140LIW3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
Frmpd3A0A140LIW3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Frmpd3A0A140LIW3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Frmpd3A0A140LIW3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
Frmpd3A0A140LIW3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Frmpd3A0A140LIW3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Frmpd3A0A140LIW3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Frmpd3A0A140LIW3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Frmpd3A0A140LIW3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Frmpd3A0A140LIW3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Frmpd3A0A140LIW3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Frmpd3A0A140LIW3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Frmpd3A0A140LIW3 Gm6085-201ENSMUST00000182774 1470 ntBASIC25.47■■□□□ 1.67
Frmpd3A0A140LIW3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC25.46■■□□□ 1.67
Frmpd3A0A140LIW3 Gm10033-202ENSMUST00000211874 928 ntBASIC25.46■■□□□ 1.67
Frmpd3A0A140LIW3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.46■■□□□ 1.67
Frmpd3A0A140LIW3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC25.46■■□□□ 1.67
Frmpd3A0A140LIW3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Frmpd3A0A140LIW3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Frmpd3A0A140LIW3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Frmpd3A0A140LIW3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC25.46■■□□□ 1.67
Frmpd3A0A140LIW3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Frmpd3A0A140LIW3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Frmpd3A0A140LIW3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC25.45■■□□□ 1.66
Frmpd3A0A140LIW3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Frmpd3A0A140LIW3 Gm4430-201ENSMUST00000192413 1943 ntBASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Gm43060-201ENSMUST00000200621 289 ntBASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Frmpd3A0A140LIW3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Frmpd3A0A140LIW3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Frmpd3A0A140LIW3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC25.43■■□□□ 1.66
Frmpd3A0A140LIW3 Gm7143-201ENSMUST00000222811 859 ntBASIC25.43■■□□□ 1.66
Frmpd3A0A140LIW3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Frmpd3A0A140LIW3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Frmpd3A0A140LIW3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Frmpd3A0A140LIW3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Frmpd3A0A140LIW3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Frmpd3A0A140LIW3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Frmpd3A0A140LIW3 Gm42642-201ENSMUST00000200683 355 ntBASIC25.41■■□□□ 1.66
Frmpd3A0A140LIW3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC25.41■■□□□ 1.66
Frmpd3A0A140LIW3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC25.41■■□□□ 1.66
Frmpd3A0A140LIW3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Frmpd3A0A140LIW3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Frmpd3A0A140LIW3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Frmpd3A0A140LIW3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Frmpd3A0A140LIW3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Frmpd3A0A140LIW3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Frmpd3A0A140LIW3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Frmpd3A0A140LIW3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
Frmpd3A0A140LIW3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Frmpd3A0A140LIW3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Frmpd3A0A140LIW3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Frmpd3A0A140LIW3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Frmpd3A0A140LIW3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Frmpd3A0A140LIW3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.38■■□□□ 1.65
Frmpd3A0A140LIW3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC25.38■■□□□ 1.65
Frmpd3A0A140LIW3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Frmpd3A0A140LIW3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Frmpd3A0A140LIW3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Frmpd3A0A140LIW3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Frmpd3A0A140LIW3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Frmpd3A0A140LIW3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Frmpd3A0A140LIW3 Gm12669-201ENSMUST00000122162 1009 ntBASIC25.37■■□□□ 1.65
Frmpd3A0A140LIW3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC25.37■■□□□ 1.65
Frmpd3A0A140LIW3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC25.37■■□□□ 1.65
Frmpd3A0A140LIW3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Frmpd3A0A140LIW3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Frmpd3A0A140LIW3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Frmpd3A0A140LIW3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Frmpd3A0A140LIW3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC25.36■■□□□ 1.65
Frmpd3A0A140LIW3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC25.36■■□□□ 1.65
Frmpd3A0A140LIW3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Frmpd3A0A140LIW3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Frmpd3A0A140LIW3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Frmpd3A0A140LIW3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC25.35■■□□□ 1.65
Frmpd3A0A140LIW3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Frmpd3A0A140LIW3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Frmpd3A0A140LIW3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Frmpd3A0A140LIW3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Frmpd3A0A140LIW3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Frmpd3A0A140LIW3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Frmpd3A0A140LIW3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Frmpd3A0A140LIW3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Frmpd3A0A140LIW3 Gm43530-201ENSMUST00000195920 274 ntBASIC25.33■■□□□ 1.65
Frmpd3A0A140LIW3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC25.33■■□□□ 1.65
Frmpd3A0A140LIW3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Frmpd3A0A140LIW3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms