Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lcmt1A0A0U1RNF2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lcmt1A0A0U1RNF2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lcmt1A0A0U1RNF2 Gm13238-201ENSMUST00000117655 780 ntBASIC23.03■■□□□ 1.28
Lcmt1A0A0U1RNF2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.03■■□□□ 1.28
Lcmt1A0A0U1RNF2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lcmt1A0A0U1RNF2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.03■■□□□ 1.28
Lcmt1A0A0U1RNF2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lcmt1A0A0U1RNF2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lcmt1A0A0U1RNF2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lcmt1A0A0U1RNF2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.02■■□□□ 1.28
Lcmt1A0A0U1RNF2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lcmt1A0A0U1RNF2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Lcmt1A0A0U1RNF2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lcmt1A0A0U1RNF2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lcmt1A0A0U1RNF2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lcmt1A0A0U1RNF2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lcmt1A0A0U1RNF2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lcmt1A0A0U1RNF2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Lcmt1A0A0U1RNF2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Lcmt1A0A0U1RNF2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lcmt1A0A0U1RNF2 Gm8093-201ENSMUST00000128935 1892 ntBASIC23■■□□□ 1.27
Lcmt1A0A0U1RNF2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lcmt1A0A0U1RNF2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Lcmt1A0A0U1RNF2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Lcmt1A0A0U1RNF2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23■■□□□ 1.27
Lcmt1A0A0U1RNF2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Lcmt1A0A0U1RNF2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lcmt1A0A0U1RNF2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lcmt1A0A0U1RNF2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lcmt1A0A0U1RNF2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Lcmt1A0A0U1RNF2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.99■■□□□ 1.27
Lcmt1A0A0U1RNF2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lcmt1A0A0U1RNF2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lcmt1A0A0U1RNF2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lcmt1A0A0U1RNF2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lcmt1A0A0U1RNF2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lcmt1A0A0U1RNF2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lcmt1A0A0U1RNF2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lcmt1A0A0U1RNF2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lcmt1A0A0U1RNF2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.97■■□□□ 1.27
Lcmt1A0A0U1RNF2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lcmt1A0A0U1RNF2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.97■■□□□ 1.27
Lcmt1A0A0U1RNF2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lcmt1A0A0U1RNF2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lcmt1A0A0U1RNF2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lcmt1A0A0U1RNF2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.97■■□□□ 1.27
Lcmt1A0A0U1RNF2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lcmt1A0A0U1RNF2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Lcmt1A0A0U1RNF2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lcmt1A0A0U1RNF2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Lcmt1A0A0U1RNF2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.96■■□□□ 1.27
Lcmt1A0A0U1RNF2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Lcmt1A0A0U1RNF2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Lcmt1A0A0U1RNF2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Lcmt1A0A0U1RNF2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Lcmt1A0A0U1RNF2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Lcmt1A0A0U1RNF2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lcmt1A0A0U1RNF2 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.95■■□□□ 1.26
Lcmt1A0A0U1RNF2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Lcmt1A0A0U1RNF2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lcmt1A0A0U1RNF2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lcmt1A0A0U1RNF2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lcmt1A0A0U1RNF2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Lcmt1A0A0U1RNF2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lcmt1A0A0U1RNF2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lcmt1A0A0U1RNF2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lcmt1A0A0U1RNF2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lcmt1A0A0U1RNF2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lcmt1A0A0U1RNF2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.94■■□□□ 1.26
Lcmt1A0A0U1RNF2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.94■■□□□ 1.26
Lcmt1A0A0U1RNF2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lcmt1A0A0U1RNF2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lcmt1A0A0U1RNF2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.93■■□□□ 1.26
Lcmt1A0A0U1RNF2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Lcmt1A0A0U1RNF2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Lcmt1A0A0U1RNF2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.93■■□□□ 1.26
Lcmt1A0A0U1RNF2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Lcmt1A0A0U1RNF2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Lcmt1A0A0U1RNF2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Lcmt1A0A0U1RNF2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
Lcmt1A0A0U1RNF2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lcmt1A0A0U1RNF2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.92■■□□□ 1.26
Lcmt1A0A0U1RNF2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Lcmt1A0A0U1RNF2 Gm10232-201ENSMUST00000089221 720 ntBASIC22.92■■□□□ 1.26
Lcmt1A0A0U1RNF2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lcmt1A0A0U1RNF2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lcmt1A0A0U1RNF2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lcmt1A0A0U1RNF2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lcmt1A0A0U1RNF2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms