Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.16■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.13■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.13■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdv2-1A0A0G2JGB9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdv2-1A0A0G2JGB9 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.08■□□□□ 0
Trdv2-1A0A0G2JGB9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdv2-1A0A0G2JGB9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms