Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Gm2546-201ENSMUST00000182630 991 ntBASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.94□□□□□ -0.18
Trim11Q99PQ2 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim11Q99PQ2 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.94□□□□□ -0.18
Trim11Q99PQ2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Gm5187-201ENSMUST00000117317 991 ntBASIC13.93□□□□□ -0.18
Trim11Q99PQ2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.93□□□□□ -0.18
Trim11Q99PQ2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.93□□□□□ -0.18
Trim11Q99PQ2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trim11Q99PQ2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms