Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkd2Q8VE28 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm13492-201ENSMUST00000119772 665 ntBASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm16505-201ENSMUST00000179981 232 ntBASIC11.19□□□□□ -0.62
Nkd2Q8VE28 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkd2Q8VE28 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Gm14130-201ENSMUST00000118417 987 ntBASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Gm9630-201ENSMUST00000178304 885 ntBASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Gm19208-201ENSMUST00000213861 912 ntBASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms