Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 NUS1P3-201ENST00000423502 862 ntBASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 BX539320.1-201ENST00000623759 877 ntBASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 CU634019.7-201ENST00000624153 1185 ntBASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 FP236241.2-201ENST00000624906 1185 ntBASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 AL033527.5-201ENST00000641382 801 ntBASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 REXO1L4P-201ENST00000605109 1937 ntBASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 RN7SL692P-201ENST00000464677 288 ntBASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 AL161772.1-201ENST00000610494 4412 ntBASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC148Q8NFR7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms