Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cfap54Q8C6S9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC11.45□□□□□ -0.58
Cfap54Q8C6S9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cfap54Q8C6S9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Cfap54Q8C6S9 Gm12453-201ENSMUST00000121981 331 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gm5870-201ENSMUST00000196461 282 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gm44647-201ENSMUST00000207402 428 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cfap54Q8C6S9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Gm44506-201ENSMUST00000206278 965 ntBASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cfap54Q8C6S9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Gm17192-201ENSMUST00000169031 511 ntBASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cfap54Q8C6S9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms