Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Gm12502-201ENSMUST00000120197 444 ntBASIC11.84□□□□□ -0.51
Rnf38Q8BI21 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Gm6222-202ENSMUST00000182143 629 ntBASIC11.84□□□□□ -0.51
Rnf38Q8BI21 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Gm43818-201ENSMUST00000200605 466 ntBASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Gm10268-201ENSMUST00000085340 555 ntBASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Gm23119-201ENSMUST00000158610 140 ntBASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Gm26927-201ENSMUST00000182385 965 ntBASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf38Q8BI21 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms