Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Gm23270-201ENSMUST00000104055 131 ntBASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Gm17376-201ENSMUST00000166016 84 ntBASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Smarcc2Q6PDG5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc2Q6PDG5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Gm24830-201ENSMUST00000102024 166 ntBASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Gm6082-201ENSMUST00000215204 454 ntBASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Gm26232-201ENSMUST00000083360 166 ntBASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc2Q6PDG5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms