Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 LAGE3P1-201ENST00000425356 484 ntBASIC14.5□□□□□ -0.09
LPCAT4Q643R3 TPT1P11-201ENST00000458482 498 ntBASIC14.5□□□□□ -0.09
LPCAT4Q643R3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LPCAT4Q643R3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 AL591122.2-201ENST00000624125 1853 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 MRPL20P1-201ENST00000400819 433 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 KRT18P27-201ENST00000427733 1299 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 FGFR3P6-201ENST00000457012 610 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 PRYP6-201ENST00000514804 343 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 HNRNPUP1-201ENST00000554987 333 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 AC061975.2-201ENST00000581722 295 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 NPAP1P7-201ENST00000613027 823 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 AC093458.2-201ENST00000623150 629 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 AL358472.4-201ENST00000633140 710 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 AP000550.4-202ENST00000639755 178 ntBASIC14.49□□□□□ -0.09
LPCAT4Q643R3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LPCAT4Q643R3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms