Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AL133267.1-201ENST00000398220 340 ntBASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AC093433.1-201ENST00000458048 571 ntBASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AC005252.2-201ENST00000624630 1141 ntBASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AL033527.4-201ENST00000641026 673 ntBASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AC105250.1-201ENST00000509378 2057 ntBASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 MSTO2P-201ENST00000314835 1709 ntBASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 CICP6-201ENST00000457191 2729 ntBASIC14□□□□□ -0.17
NPIPA2E9PIF3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 DRD5P1-201ENST00000456605 1438 ntBASIC14□□□□□ -0.17
NPIPA2E9PIF3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 AC007551.1-201ENST00000457394 519 ntBASIC14□□□□□ -0.17
NPIPA2E9PIF3 MFF-223ENST00000524634 647 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 AP001582.1-201ENST00000525856 295 ntBASIC14□□□□□ -0.17
NPIPA2E9PIF3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14□□□□□ -0.17
NPIPA2E9PIF3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms