Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Gm42627-201ENSMUST00000197347 224 ntBASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.76□□□□□ -0.37
Cpne8Q9DC53 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpne8Q9DC53 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Gm14832-201ENSMUST00000121289 322 ntBASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne8Q9DC53 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Gm24934-201ENSMUST00000103764 111 ntBASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Gm12957-201ENSMUST00000117835 377 ntBASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Gm43433-201ENSMUST00000196573 481 ntBASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.74□□□□□ -0.37
Cpne8Q9DC53 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.74□□□□□ -0.37
Cpne8Q9DC53 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne8Q9DC53 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms