Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm9630-201ENSMUST00000178304 885 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm9230-201ENSMUST00000188228 532 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm18056-201ENSMUST00000207670 568 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm18061-201ENSMUST00000208350 562 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm18063-201ENSMUST00000208529 568 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm18052-201ENSMUST00000208750 559 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gzmn-202ENSMUST00000225535 989 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gtf2ird2Q99NI3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm14644-201ENSMUST00000116671 647 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm45598-202ENSMUST00000210719 986 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.62□□□□□ -0.39
Gtf2ird2Q99NI3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf2ird2Q99NI3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf2ird2Q99NI3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.61□□□□□ -0.39
Gtf2ird2Q99NI3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf2ird2Q99NI3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf2ird2Q99NI3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf2ird2Q99NI3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf2ird2Q99NI3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf2ird2Q99NI3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Gtf2ird2Q99NI3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf2ird2Q99NI3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 158.3 ms