Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm22764-201ENSMUST00000158370 92 ntBASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm28631-201ENSMUST00000190740 334 ntBASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm42599-201ENSMUST00000201308 469 ntBASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 AC154683.1-201ENSMUST00000228409 1284 ntBASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm11Q8BUV6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Snord83b-201ENSMUST00000104546 94 ntBASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gm11618-201ENSMUST00000117946 267 ntBASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gm15703-201ENSMUST00000120250 880 ntBASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gm16296-201ENSMUST00000159905 325 ntBASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gm22121-201ENSMUST00000175148 54 ntBASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gm38384-201ENSMUST00000195413 1122 ntBASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 AC168059.2-201ENSMUST00000224473 333 ntBASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm11Q8BUV6 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.71
Lsm11Q8BUV6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms