Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC004066.1-201ENST00000502488 802 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 LINC00634-202ENST00000505157 222 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC073911.3-201ENST00000624401 631 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AL132780.4-201ENST00000624870 1135 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 PAUPAR-201ENST00000630360 2965 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC010234.1-201ENST00000494599 870 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC012158.2-201ENST00000536546 354 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 IL9RP3-201ENST00000442856 1674 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC091951.1-201ENST00000512854 2465 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AP000356.3-201ENST00000382243 753 ntBASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 DUX4L46-201ENST00000566845 751 ntBASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 MIR4522-201ENST00000584932 87 ntBASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AP001527.2-201ENST00000614441 631 ntBASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AC244250.3-201ENST00000620749 366 ntBASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AL157791.1-201ENST00000553667 1699 ntBASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 FAU-202ENST00000434372 533 ntTSL 2 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AP000911.2-201ENST00000534330 502 ntBASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AL360270.3-201ENST00000609118 1348 ntBASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
VPS13BQ7Z7G8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms