Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Gm45331-201ENSMUST00000209868 554 ntBASIC13.49□□□□□ -0.25
Bbof1Q3V079 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.49□□□□□ -0.25
Bbof1Q3V079 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Gm22058-201ENSMUST00000083393 310 ntBASIC13.49□□□□□ -0.25
Bbof1Q3V079 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bbof1Q3V079 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.48□□□□□ -0.25
Bbof1Q3V079 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Gm12241-201ENSMUST00000118330 726 ntBASIC13.48□□□□□ -0.25
Bbof1Q3V079 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.48□□□□□ -0.25
Bbof1Q3V079 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Gm27501-201ENSMUST00000183599 107 ntBASIC13.48□□□□□ -0.25
Bbof1Q3V079 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Gm45925-201ENSMUST00000218882 744 ntBASIC13.48□□□□□ -0.25
Bbof1Q3V079 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Bbof1Q3V079 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.47□□□□□ -0.25
Bbof1Q3V079 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.47□□□□□ -0.25
Bbof1Q3V079 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Gm13786-201ENSMUST00000122371 333 ntBASIC13.47□□□□□ -0.25
Bbof1Q3V079 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.47□□□□□ -0.25
Bbof1Q3V079 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Gm9368-201ENSMUST00000219348 831 ntBASIC13.47□□□□□ -0.25
Bbof1Q3V079 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Bbof1Q3V079 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Bbof1Q3V079 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.46□□□□□ -0.25
Bbof1Q3V079 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Bbof1Q3V079 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms