Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col10a1Q05306 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.32□□□□□ -0.6
Col10a1Q05306 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Gm24934-201ENSMUST00000103764 111 ntBASIC11.32□□□□□ -0.6
Col10a1Q05306 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Gm7584-201ENSMUST00000175829 940 ntBASIC11.32□□□□□ -0.6
Col10a1Q05306 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.32□□□□□ -0.6
Col10a1Q05306 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.32□□□□□ -0.6
Col10a1Q05306 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.32□□□□□ -0.6
Col10a1Q05306 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Col10a1Q05306 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Col10a1Q05306 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.32□□□□□ -0.6
Col10a1Q05306 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col10a1Q05306 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col10a1Q05306 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.31□□□□□ -0.6
Col10a1Q05306 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.31□□□□□ -0.6
Col10a1Q05306 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.31□□□□□ -0.6
Col10a1Q05306 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col10a1Q05306 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col10a1Q05306 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Gm13350-201ENSMUST00000120519 479 ntBASIC11.31□□□□□ -0.6
Col10a1Q05306 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Col10a1Q05306 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.31□□□□□ -0.6
Col10a1Q05306 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.31□□□□□ -0.6
Col10a1Q05306 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.31□□□□□ -0.6
Col10a1Q05306 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col10a1Q05306 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col10a1Q05306 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.31□□□□□ -0.6
Col10a1Q05306 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.31□□□□□ -0.6
Col10a1Q05306 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col10a1Q05306 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.31□□□□□ -0.6
Col10a1Q05306 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms