Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sox3P53784 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox3P53784 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.78□□□□□ -0.52
Sox3P53784 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.78□□□□□ -0.52
Sox3P53784 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sox3P53784 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.78□□□□□ -0.52
Sox3P53784 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Sox3P53784 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Sox3P53784 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sox3P53784 Gm17040-202ENSMUST00000170597 889 ntBASIC11.78□□□□□ -0.52
Sox3P53784 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox3P53784 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sox3P53784 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox3P53784 Gm7848-201ENSMUST00000210739 718 ntBASIC11.78□□□□□ -0.52
Sox3P53784 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.78□□□□□ -0.52
Sox3P53784 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.78□□□□□ -0.52
Sox3P53784 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.78□□□□□ -0.52
Sox3P53784 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.78□□□□□ -0.52
Sox3P53784 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Sox3P53784 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox3P53784 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sox3P53784 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox3P53784 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox3P53784 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox3P53784 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox3P53784 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.77□□□□□ -0.52
Sox3P53784 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox3P53784 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox3P53784 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sox3P53784 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox3P53784 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.77□□□□□ -0.52
Sox3P53784 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.77□□□□□ -0.52
Sox3P53784 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox3P53784 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox3P53784 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox3P53784 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Sox3P53784 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Gm16397-201ENSMUST00000122201 494 ntBASIC11.77□□□□□ -0.53
Sox3P53784 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.77□□□□□ -0.53
Sox3P53784 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.77□□□□□ -0.53
Sox3P53784 Gm19459-201ENSMUST00000176240 835 ntBASIC11.77□□□□□ -0.53
Sox3P53784 Mir6958-201ENSMUST00000184207 73 ntBASIC11.77□□□□□ -0.53
Sox3P53784 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox3P53784 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.77□□□□□ -0.53
Sox3P53784 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox3P53784 Gm7600-201ENSMUST00000209657 785 ntBASIC11.77□□□□□ -0.53
Sox3P53784 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sox3P53784 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.77□□□□□ -0.53
Sox3P53784 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox3P53784 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox3P53784 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox3P53784 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms