Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Gm6621-201ENSMUST00000193251 772 ntBASIC10.69□□□□□ -0.7
PtcraP0C6B2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.69□□□□□ -0.7
PtcraP0C6B2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.69□□□□□ -0.7
PtcraP0C6B2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PtcraP0C6B2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm11930-201ENSMUST00000117788 190 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm25116-201ENSMUST00000157191 122 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm35960-201ENSMUST00000202712 767 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PtcraP0C6B2 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.68□□□□□ -0.7
PtcraP0C6B2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms