Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Gm30671-201ENSMUST00000214898 318 ntBASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hfm1D3Z4R1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Gm5434-202ENSMUST00000222384 1451 ntBASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Gm5434-201ENSMUST00000071825 1451 ntBASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Gm39288-201ENSMUST00000210554 446 ntBASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 AC118639.2-201ENSMUST00000226289 223 ntBASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hfm1D3Z4R1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Gm19015-201ENSMUST00000184002 1189 ntBASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Gm18776-201ENSMUST00000188833 654 ntBASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 CT025602.2-201ENSMUST00000226553 772 ntBASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Gm10263-201ENSMUST00000085163 300 ntBASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hfm1D3Z4R1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Ssr1-203ENSMUST00000225246 1825 ntBASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Gm17192-201ENSMUST00000169031 511 ntBASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 AC238811.4-201ENSMUST00000178019 1246 ntBASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 AC238940.3-201ENSMUST00000178830 1246 ntBASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC16.92■□□□□ 0.3
Hfm1D3Z4R1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gm5641-201ENSMUST00000091130 1488 ntBASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gm24791-201ENSMUST00000104284 131 ntBASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gm13351-201ENSMUST00000118087 414 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms