Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Hist3h2bbQ8CGP0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Hist3h2bbQ8CGP0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hist3h2bbQ8CGP0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Mir686-201ENSMUST00000102174 109 ntBASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm5035-201ENSMUST00000215581 927 ntBASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hist3h2bbQ8CGP0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm8668-201ENSMUST00000120559 1447 ntBASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Otx2os1-206ENSMUST00000228153 787 ntBASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hist3h2bbQ8CGP0 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms