Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 AY036118-201ENSMUST00000200021 923 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm12795-201ENSMUST00000117594 539 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm15573-201ENSMUST00000119487 540 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Prrxl1-205ENSMUST00000228878 723 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 AC091458.1-201ENSMUST00000220902 1361 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm26660-202ENSMUST00000223620 4112 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm18059-201ENSMUST00000208073 580 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm43045-201ENSMUST00000198725 2095 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Mir1901-201ENSMUST00000122616 78 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm7395-201ENSMUST00000216059 1045 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gm6198-201ENSMUST00000191337 2929 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC4.17□□□□□ -1.74
Syne1Q6ZWR6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms