Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.38□□□□□ -0.75
Cxcl13O55038 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.38□□□□□ -0.75
Cxcl13O55038 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.37□□□□□ -0.75
Cxcl13O55038 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.37□□□□□ -0.75
Cxcl13O55038 Gm11331-201ENSMUST00000119764 288 ntBASIC10.37□□□□□ -0.75
Cxcl13O55038 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.37□□□□□ -0.75
Cxcl13O55038 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Gm43184-201ENSMUST00000197247 542 ntBASIC10.37□□□□□ -0.75
Cxcl13O55038 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.37□□□□□ -0.75
Cxcl13O55038 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Gm7848-201ENSMUST00000210739 718 ntBASIC10.37□□□□□ -0.75
Cxcl13O55038 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.37□□□□□ -0.75
Cxcl13O55038 Gm270-201ENSMUST00000223010 976 ntBASIC10.37□□□□□ -0.75
Cxcl13O55038 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.37□□□□□ -0.75
Cxcl13O55038 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Cxcl13O55038 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cxcl13O55038 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.36□□□□□ -0.75
Cxcl13O55038 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms